SLC12A5 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-expression

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[Homology]

Score

SLC12A5

Solute carrier family 12 member 5. (1130 aa)

Predicted Functional Partners:

MST1R

0.555

RIMS3

0.533

SLC26A1

0.488

EWSR1

0.486

ENSPSTP00000019127

0.468

ENSPSTP00000022214

0.468

LGALS3

0.447

ENSPSTP00000016433

0.440

ENSPSTP00000017193

0.440

ENSPSTP00000023377

0.440

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPSTP00000016433	ENSPSTP00000017193	ENSPSTP00000016433	ENSPSTP00000017193	annotation not available	annotation not available	0.919
ENSPSTP00000016433	SLC12A5	ENSPSTP00000016433	ENSPSTP00000001352	annotation not available	Solute carrier family 12 member 5.	0.440
ENSPSTP00000017193	ENSPSTP00000016433	ENSPSTP00000017193	ENSPSTP00000016433	annotation not available	annotation not available	0.919
ENSPSTP00000017193	ENSPSTP00000023377	ENSPSTP00000017193	ENSPSTP00000023377	annotation not available	annotation not available	0.899
ENSPSTP00000017193	SLC12A5	ENSPSTP00000017193	ENSPSTP00000001352	annotation not available	Solute carrier family 12 member 5.	0.440
ENSPSTP00000019127	EWSR1	ENSPSTP00000019127	ENSPSTP00000026204	annotation not available	EWS RNA binding protein 1.	0.577
ENSPSTP00000019127	SLC12A5	ENSPSTP00000019127	ENSPSTP00000001352	annotation not available	Solute carrier family 12 member 5.	0.468
ENSPSTP00000022214	EWSR1	ENSPSTP00000022214	ENSPSTP00000026204	annotation not available	EWS RNA binding protein 1.	0.577
ENSPSTP00000022214	SLC12A5	ENSPSTP00000022214	ENSPSTP00000001352	annotation not available	Solute carrier family 12 member 5.	0.468
ENSPSTP00000023377	ENSPSTP00000017193	ENSPSTP00000023377	ENSPSTP00000017193	annotation not available	annotation not available	0.899
ENSPSTP00000023377	SLC12A5	ENSPSTP00000023377	ENSPSTP00000001352	annotation not available	Solute carrier family 12 member 5.	0.440
EWSR1	ENSPSTP00000019127	ENSPSTP00000026204	ENSPSTP00000019127	EWS RNA binding protein 1.	annotation not available	0.577
EWSR1	ENSPSTP00000022214	ENSPSTP00000026204	ENSPSTP00000022214	EWS RNA binding protein 1.	annotation not available	0.577
EWSR1	SLC12A5	ENSPSTP00000026204	ENSPSTP00000001352	EWS RNA binding protein 1.	Solute carrier family 12 member 5.	0.486
LGALS3	SLC12A5	ENSPSTP00000000235	ENSPSTP00000001352	Galectin 3.	Solute carrier family 12 member 5.	0.447
MST1R	SLC12A5	ENSPSTP00000000076	ENSPSTP00000001352	Macrophage stimulating 1 receptor.	Solute carrier family 12 member 5.	0.555
RIMS3	SLC12A5	ENSPSTP00000009465	ENSPSTP00000001352	Regulating synaptic membrane exocytosis 3.	Solute carrier family 12 member 5.	0.533
SLC12A5	ENSPSTP00000016433	ENSPSTP00000001352	ENSPSTP00000016433	Solute carrier family 12 member 5.	annotation not available	0.440
SLC12A5	ENSPSTP00000017193	ENSPSTP00000001352	ENSPSTP00000017193	Solute carrier family 12 member 5.	annotation not available	0.440
SLC12A5	ENSPSTP00000019127	ENSPSTP00000001352	ENSPSTP00000019127	Solute carrier family 12 member 5.	annotation not available	0.468