Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO2LIM domain only 2. (216 aa)    
Predicted Functional Partners:
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.999
LDB1
LIM domain binding 1.
    
 0.974
ENSPSTP00000004937
annotation not available
    
 0.959
ENSPSTP00000017988
annotation not available
    
 0.959
TAL2
TAL bHLH transcription factor 2.
    
 0.900
POLR2D
RNA polymerase II subunit D.
    
   0.896
POLR2C
RNA polymerase II subunit C.
    
   0.893
RECQL5
RecQ like helicase 5.
    
   0.886
GATA2
GATA binding protein 2.
    
 0.880
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
    
   0.870
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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