MYOD1 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

MYOD1

Myogenic differentiation 1. (297 aa)

Predicted Functional Partners:

EP300

0.988

ENSPSTP00000003186

0.984

FBXO32

0.984

CREBBP

0.977

MYOG

0.929

MEF2C

0.922

PAX3

0.904

MEF2A

0.899

ENSPSTP00000000213

0.890

ENSPSTP00000002929

0.890

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREBBP	ENSPSTP00000000213	ENSPSTP00000014989	ENSPSTP00000000213	CREB binding protein.	annotation not available	0.701
CREBBP	ENSPSTP00000002929	ENSPSTP00000014989	ENSPSTP00000002929	CREB binding protein.	annotation not available	0.701
CREBBP	EP300	ENSPSTP00000014989	ENSPSTP00000025632	CREB binding protein.	E1A binding protein p300.	0.999
CREBBP	MEF2A	ENSPSTP00000014989	ENSPSTP00000006038	CREB binding protein.	Myocyte enhancer factor 2A.	0.672
CREBBP	MEF2C	ENSPSTP00000014989	ENSPSTP00000003339	CREB binding protein.	Myocyte enhancer factor 2C.	0.672
CREBBP	MYOD1	ENSPSTP00000014989	ENSPSTP00000001533	CREB binding protein.	Myogenic differentiation 1.	0.977
CREBBP	MYOG	ENSPSTP00000014989	ENSPSTP00000009693	CREB binding protein.	Myogenin.	0.485
ENSPSTP00000000213	CREBBP	ENSPSTP00000000213	ENSPSTP00000014989	annotation not available	CREB binding protein.	0.701
ENSPSTP00000000213	ENSPSTP00000003186	ENSPSTP00000000213	ENSPSTP00000003186	annotation not available	annotation not available	0.764
ENSPSTP00000000213	EP300	ENSPSTP00000000213	ENSPSTP00000025632	annotation not available	E1A binding protein p300.	0.673
ENSPSTP00000000213	MEF2A	ENSPSTP00000000213	ENSPSTP00000006038	annotation not available	Myocyte enhancer factor 2A.	0.471
ENSPSTP00000000213	MYOD1	ENSPSTP00000000213	ENSPSTP00000001533	annotation not available	Myogenic differentiation 1.	0.890
ENSPSTP00000000213	MYOG	ENSPSTP00000000213	ENSPSTP00000009693	annotation not available	Myogenin.	0.759
ENSPSTP00000002929	CREBBP	ENSPSTP00000002929	ENSPSTP00000014989	annotation not available	CREB binding protein.	0.701
ENSPSTP00000002929	ENSPSTP00000003186	ENSPSTP00000002929	ENSPSTP00000003186	annotation not available	annotation not available	0.764
ENSPSTP00000002929	EP300	ENSPSTP00000002929	ENSPSTP00000025632	annotation not available	E1A binding protein p300.	0.673
ENSPSTP00000002929	MEF2A	ENSPSTP00000002929	ENSPSTP00000006038	annotation not available	Myocyte enhancer factor 2A.	0.471
ENSPSTP00000002929	MYOD1	ENSPSTP00000002929	ENSPSTP00000001533	annotation not available	Myogenic differentiation 1.	0.890
ENSPSTP00000002929	MYOG	ENSPSTP00000002929	ENSPSTP00000009693	annotation not available	Myogenin.	0.760
ENSPSTP00000003186	ENSPSTP00000000213	ENSPSTP00000003186	ENSPSTP00000000213	annotation not available	annotation not available	0.764