ROMO1 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ROMO1

Reactive oxygen species modulator 1. (79 aa)

Predicted Functional Partners:

TIMM17A

0.972

NDUFB1

0.970

ENSPSTP00000001622

0.931

ENSPSTP00000009944

0.924

ENSPSTP00000005696

0.892

UQCR10

0.886

ENSPSTP00000018053

0.864

ENSPSTP00000016084

0.858

IMMT

0.857

OMA1

0.855

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPSTP00000001622	ENSPSTP00000009944	ENSPSTP00000001622	ENSPSTP00000009944	annotation not available	annotation not available	0.959
ENSPSTP00000001622	IMMT	ENSPSTP00000001622	ENSPSTP00000004857	annotation not available	Inner membrane mitochondrial protein.	0.620
ENSPSTP00000001622	ROMO1	ENSPSTP00000001622	ENSPSTP00000001654	annotation not available	Reactive oxygen species modulator 1.	0.931
ENSPSTP00000001622	TIMM17A	ENSPSTP00000001622	ENSPSTP00000009502	annotation not available	Translocase of inner mitochondrial membrane 17A.	0.979
ENSPSTP00000005696	ENSPSTP00000018053	ENSPSTP00000005696	ENSPSTP00000018053	annotation not available	annotation not available	0.886
ENSPSTP00000005696	NDUFB1	ENSPSTP00000005696	ENSPSTP00000002699	annotation not available	NADH:ubiquinone oxidoreductase subunit B1.	0.997
ENSPSTP00000005696	ROMO1	ENSPSTP00000005696	ENSPSTP00000001654	annotation not available	Reactive oxygen species modulator 1.	0.892
ENSPSTP00000005696	TIMM17A	ENSPSTP00000005696	ENSPSTP00000009502	annotation not available	Translocase of inner mitochondrial membrane 17A.	0.432
ENSPSTP00000005696	UQCR10	ENSPSTP00000005696	ENSPSTP00000024002	annotation not available	Ubiquinol-cytochrome c reductase, complex III subunit X.	0.999
ENSPSTP00000009944	ENSPSTP00000001622	ENSPSTP00000009944	ENSPSTP00000001622	annotation not available	annotation not available	0.959
ENSPSTP00000009944	ENSPSTP00000016084	ENSPSTP00000009944	ENSPSTP00000016084	annotation not available	annotation not available	0.916
ENSPSTP00000009944	IMMT	ENSPSTP00000009944	ENSPSTP00000004857	annotation not available	Inner membrane mitochondrial protein.	0.728
ENSPSTP00000009944	ROMO1	ENSPSTP00000009944	ENSPSTP00000001654	annotation not available	Reactive oxygen species modulator 1.	0.924
ENSPSTP00000009944	TIMM17A	ENSPSTP00000009944	ENSPSTP00000009502	annotation not available	Translocase of inner mitochondrial membrane 17A.	0.984
ENSPSTP00000016084	ENSPSTP00000009944	ENSPSTP00000016084	ENSPSTP00000009944	annotation not available	annotation not available	0.916
ENSPSTP00000016084	IMMT	ENSPSTP00000016084	ENSPSTP00000004857	annotation not available	Inner membrane mitochondrial protein.	0.620
ENSPSTP00000016084	ROMO1	ENSPSTP00000016084	ENSPSTP00000001654	annotation not available	Reactive oxygen species modulator 1.	0.858
ENSPSTP00000016084	TIMM17A	ENSPSTP00000016084	ENSPSTP00000009502	annotation not available	Translocase of inner mitochondrial membrane 17A.	0.956
ENSPSTP00000018053	ENSPSTP00000005696	ENSPSTP00000018053	ENSPSTP00000005696	annotation not available	annotation not available	0.886
ENSPSTP00000018053	NDUFB1	ENSPSTP00000018053	ENSPSTP00000002699	annotation not available	NADH:ubiquinone oxidoreductase subunit B1.	0.538