RBM39 protein (Pavo cristatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

RBM39

RNA binding motif protein 39. (506 aa)

Predicted Functional Partners:

PRPF40A

0.997

ENSPSTP00000000280

0.993

ENSPSTP00000002843

0.992

RBM25

0.992

CDC40

0.990

SAP18

0.989

ENSPSTP00000020277

0.988

SF3B1

0.987

ENSPSTP00000025928

0.981

DDX5

0.981

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC40	DDX5	ENSPSTP00000003099	ENSPSTP00000025936	Cell division cycle 40.	DEAD-box helicase 5.	0.763
CDC40	ENSPSTP00000002843	ENSPSTP00000003099	ENSPSTP00000002843	Cell division cycle 40.	annotation not available	0.732
CDC40	ENSPSTP00000020277	ENSPSTP00000003099	ENSPSTP00000020277	Cell division cycle 40.	annotation not available	0.682
CDC40	ENSPSTP00000025928	ENSPSTP00000003099	ENSPSTP00000025928	Cell division cycle 40.	annotation not available	0.763
CDC40	PRPF40A	ENSPSTP00000003099	ENSPSTP00000008021	Cell division cycle 40.	pre-mRNA processing factor 40 homolog A.	0.949
CDC40	RBM25	ENSPSTP00000003099	ENSPSTP00000002855	Cell division cycle 40.	RNA binding motif protein 25.	0.732
CDC40	RBM39	ENSPSTP00000003099	ENSPSTP00000001668	Cell division cycle 40.	RNA binding motif protein 39.	0.990
CDC40	SF3B1	ENSPSTP00000003099	ENSPSTP00000013334	Cell division cycle 40.	Splicing factor 3b subunit 1.	0.928
DDX5	CDC40	ENSPSTP00000025936	ENSPSTP00000003099	DEAD-box helicase 5.	Cell division cycle 40.	0.763
DDX5	ENSPSTP00000000280	ENSPSTP00000025936	ENSPSTP00000000280	DEAD-box helicase 5.	annotation not available	0.879
DDX5	ENSPSTP00000002843	ENSPSTP00000025936	ENSPSTP00000002843	DEAD-box helicase 5.	annotation not available	0.717
DDX5	ENSPSTP00000020277	ENSPSTP00000025936	ENSPSTP00000020277	DEAD-box helicase 5.	annotation not available	0.875
DDX5	ENSPSTP00000025928	ENSPSTP00000025936	ENSPSTP00000025928	DEAD-box helicase 5.	annotation not available	0.879
DDX5	PRPF40A	ENSPSTP00000025936	ENSPSTP00000008021	DEAD-box helicase 5.	pre-mRNA processing factor 40 homolog A.	0.724
DDX5	RBM25	ENSPSTP00000025936	ENSPSTP00000002855	DEAD-box helicase 5.	RNA binding motif protein 25.	0.717
DDX5	RBM39	ENSPSTP00000025936	ENSPSTP00000001668	DEAD-box helicase 5.	RNA binding motif protein 39.	0.981
DDX5	SF3B1	ENSPSTP00000025936	ENSPSTP00000013334	DEAD-box helicase 5.	Splicing factor 3b subunit 1.	0.935
ENSPSTP00000000280	DDX5	ENSPSTP00000000280	ENSPSTP00000025936	annotation not available	DEAD-box helicase 5.	0.879
ENSPSTP00000000280	ENSPSTP00000002843	ENSPSTP00000000280	ENSPSTP00000002843	annotation not available	annotation not available	0.789
ENSPSTP00000000280	ENSPSTP00000025928	ENSPSTP00000000280	ENSPSTP00000025928	annotation not available	annotation not available	0.879