RBM39 protein (Pavo cristatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

RBM39

RNA binding motif protein 39. (506 aa)

Predicted Functional Partners:

ENSPSTP00000000280

0.999

CDC5L

0.994

U2AF2

0.981

SF3B1

0.963

RBM25

0.932

ENSPSTP00000002843

0.928

DDA1

0.920

ENSPSTP00000025928

0.906

DDX5

0.906

DDB1

0.872

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC5L	DDX5	ENSPSTP00000021166	ENSPSTP00000025936	Cell division cycle 5 like.	DEAD-box helicase 5.	0.443
CDC5L	ENSPSTP00000025928	ENSPSTP00000021166	ENSPSTP00000025928	Cell division cycle 5 like.	annotation not available	0.443
CDC5L	RBM39	ENSPSTP00000021166	ENSPSTP00000001668	Cell division cycle 5 like.	RNA binding motif protein 39.	0.994
CDC5L	SF3B1	ENSPSTP00000021166	ENSPSTP00000013334	Cell division cycle 5 like.	Splicing factor 3b subunit 1.	0.999
CDC5L	U2AF2	ENSPSTP00000021166	ENSPSTP00000012704	Cell division cycle 5 like.	U2 small nuclear RNA auxiliary factor 2.	0.999
DDA1	DDB1	ENSPSTP00000013827	ENSPSTP00000020312	DET1 and DDB1 associated 1.	Damage specific DNA binding protein 1.	0.999
DDA1	RBM39	ENSPSTP00000013827	ENSPSTP00000001668	DET1 and DDB1 associated 1.	RNA binding motif protein 39.	0.920
DDB1	DDA1	ENSPSTP00000020312	ENSPSTP00000013827	Damage specific DNA binding protein 1.	DET1 and DDB1 associated 1.	0.999
DDB1	RBM39	ENSPSTP00000020312	ENSPSTP00000001668	Damage specific DNA binding protein 1.	RNA binding motif protein 39.	0.872
DDB1	SF3B1	ENSPSTP00000020312	ENSPSTP00000013334	Damage specific DNA binding protein 1.	Splicing factor 3b subunit 1.	0.611
DDX5	CDC5L	ENSPSTP00000025936	ENSPSTP00000021166	DEAD-box helicase 5.	Cell division cycle 5 like.	0.443
DDX5	ENSPSTP00000000280	ENSPSTP00000025936	ENSPSTP00000000280	DEAD-box helicase 5.	annotation not available	0.751
DDX5	ENSPSTP00000002843	ENSPSTP00000025936	ENSPSTP00000002843	DEAD-box helicase 5.	annotation not available	0.712
DDX5	ENSPSTP00000025928	ENSPSTP00000025936	ENSPSTP00000025928	DEAD-box helicase 5.	annotation not available	0.879
DDX5	RBM25	ENSPSTP00000025936	ENSPSTP00000002855	DEAD-box helicase 5.	RNA binding motif protein 25.	0.712
DDX5	RBM39	ENSPSTP00000025936	ENSPSTP00000001668	DEAD-box helicase 5.	RNA binding motif protein 39.	0.906
DDX5	SF3B1	ENSPSTP00000025936	ENSPSTP00000013334	DEAD-box helicase 5.	Splicing factor 3b subunit 1.	0.931
DDX5	U2AF2	ENSPSTP00000025936	ENSPSTP00000012704	DEAD-box helicase 5.	U2 small nuclear RNA auxiliary factor 2.	0.428
ENSPSTP00000000280	DDX5	ENSPSTP00000000280	ENSPSTP00000025936	annotation not available	DEAD-box helicase 5.	0.751
ENSPSTP00000000280	ENSPSTP00000002843	ENSPSTP00000000280	ENSPSTP00000002843	annotation not available	annotation not available	0.765