Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDHALactate dehydrogenase A. (332 aa)    
Predicted Functional Partners:
PKM
Pyruvate kinase M1/2.
  
 0.983
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.983
CS
Citrate synthase.
  
 0.972
ENSPSTP00000015173
annotation not available
  
 0.967
PDHB
Pyruvate dehydrogenase E1 beta subunit.
  
 0.967
ENSPSTP00000012187
annotation not available
     
 0.964
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.963
ENSPSTP00000023851
annotation not available
  
 0.948
GPT2
Glutamic--pyruvic transaminase 2.
  
 0.946
ALDOC
Aldolase, fructose-bisphosphate C.
   
 0.944
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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