RAB11FIP2 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RAB11FIP2

RAB11 family interacting protein 2. (430 aa)

Predicted Functional Partners:

RAB11A

0.983

RAB25

0.983

ENSPSTP00000024422

0.983

ENSPSTP00000018078

0.982

ENSPSTP00000001572

0.924

ENSPSTP00000012609

0.860

EHD3

0.840

MYO5C

0.802

MYO5A

0.802

ENSPSTP00000024915

0.791

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHD3	ENSPSTP00000001572	ENSPSTP00000001707	ENSPSTP00000001572	EH domain containing 3.	annotation not available	0.660
EHD3	ENSPSTP00000012609	ENSPSTP00000001707	ENSPSTP00000012609	EH domain containing 3.	annotation not available	0.589
EHD3	RAB11FIP2	ENSPSTP00000001707	ENSPSTP00000001732	EH domain containing 3.	RAB11 family interacting protein 2.	0.840
ENSPSTP00000001572	EHD3	ENSPSTP00000001572	ENSPSTP00000001707	annotation not available	EH domain containing 3.	0.660
ENSPSTP00000001572	ENSPSTP00000012609	ENSPSTP00000001572	ENSPSTP00000012609	annotation not available	annotation not available	0.826
ENSPSTP00000001572	ENSPSTP00000018078	ENSPSTP00000001572	ENSPSTP00000018078	annotation not available	annotation not available	0.978
ENSPSTP00000001572	ENSPSTP00000024422	ENSPSTP00000001572	ENSPSTP00000024422	annotation not available	annotation not available	0.976
ENSPSTP00000001572	MYO5A	ENSPSTP00000001572	ENSPSTP00000009427	annotation not available	Myosin VA.	0.782
ENSPSTP00000001572	MYO5C	ENSPSTP00000001572	ENSPSTP00000006453	annotation not available	Myosin VC.	0.782
ENSPSTP00000001572	RAB11A	ENSPSTP00000001572	ENSPSTP00000005993	annotation not available	RAB11A, member RAS oncogene family.	0.976
ENSPSTP00000001572	RAB11FIP2	ENSPSTP00000001572	ENSPSTP00000001732	annotation not available	RAB11 family interacting protein 2.	0.924
ENSPSTP00000001572	RAB25	ENSPSTP00000001572	ENSPSTP00000018095	annotation not available	RAB25, member RAS oncogene family.	0.887
ENSPSTP00000012609	EHD3	ENSPSTP00000012609	ENSPSTP00000001707	annotation not available	EH domain containing 3.	0.589
ENSPSTP00000012609	ENSPSTP00000001572	ENSPSTP00000012609	ENSPSTP00000001572	annotation not available	annotation not available	0.826
ENSPSTP00000012609	ENSPSTP00000018078	ENSPSTP00000012609	ENSPSTP00000018078	annotation not available	annotation not available	0.844
ENSPSTP00000012609	ENSPSTP00000024422	ENSPSTP00000012609	ENSPSTP00000024422	annotation not available	annotation not available	0.844
ENSPSTP00000012609	RAB11A	ENSPSTP00000012609	ENSPSTP00000005993	annotation not available	RAB11A, member RAS oncogene family.	0.844
ENSPSTP00000012609	RAB11FIP2	ENSPSTP00000012609	ENSPSTP00000001732	annotation not available	RAB11 family interacting protein 2.	0.860
ENSPSTP00000012609	RAB25	ENSPSTP00000012609	ENSPSTP00000018095	annotation not available	RAB25, member RAS oncogene family.	0.741
ENSPSTP00000018078	ENSPSTP00000001572	ENSPSTP00000018078	ENSPSTP00000001572	annotation not available	annotation not available	0.978