TNMD protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TNMD

Tenomodulin. (319 aa)

Predicted Functional Partners:

ENSPSTP00000022465

0.773

FMOD

0.720

ENSPSTP00000000417

0.633

ENSPSTP00000012880

0.602

ENSPSTP00000012889

0.602

SCX

0.573

TCF15

0.560

KERA

0.559

GDF7

0.551

ASPN

0.550

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASPN	ENSPSTP00000000417	ENSPSTP00000007374	ENSPSTP00000000417	Asporin.	annotation not available	0.705
ASPN	FMOD	ENSPSTP00000007374	ENSPSTP00000005903	Asporin.	Fibromodulin.	0.679
ASPN	KERA	ENSPSTP00000007374	ENSPSTP00000012895	Asporin.	Keratocan.	0.593
ASPN	TNMD	ENSPSTP00000007374	ENSPSTP00000001874	Asporin.	Tenomodulin.	0.550
ENSPSTP00000000417	ASPN	ENSPSTP00000000417	ENSPSTP00000007374	annotation not available	Asporin.	0.705
ENSPSTP00000000417	ENSPSTP00000012880	ENSPSTP00000000417	ENSPSTP00000012880	annotation not available	annotation not available	0.659
ENSPSTP00000000417	ENSPSTP00000012889	ENSPSTP00000000417	ENSPSTP00000012889	annotation not available	annotation not available	0.659
ENSPSTP00000000417	ENSPSTP00000022465	ENSPSTP00000000417	ENSPSTP00000022465	annotation not available	annotation not available	0.418
ENSPSTP00000000417	FMOD	ENSPSTP00000000417	ENSPSTP00000005903	annotation not available	Fibromodulin.	0.872
ENSPSTP00000000417	TNMD	ENSPSTP00000000417	ENSPSTP00000001874	annotation not available	Tenomodulin.	0.633
ENSPSTP00000012880	ENSPSTP00000000417	ENSPSTP00000012880	ENSPSTP00000000417	annotation not available	annotation not available	0.659
ENSPSTP00000012880	ENSPSTP00000022465	ENSPSTP00000012880	ENSPSTP00000022465	annotation not available	annotation not available	0.505
ENSPSTP00000012880	FMOD	ENSPSTP00000012880	ENSPSTP00000005903	annotation not available	Fibromodulin.	0.742
ENSPSTP00000012880	TNMD	ENSPSTP00000012880	ENSPSTP00000001874	annotation not available	Tenomodulin.	0.602
ENSPSTP00000012889	ENSPSTP00000000417	ENSPSTP00000012889	ENSPSTP00000000417	annotation not available	annotation not available	0.659
ENSPSTP00000012889	ENSPSTP00000022465	ENSPSTP00000012889	ENSPSTP00000022465	annotation not available	annotation not available	0.505
ENSPSTP00000012889	FMOD	ENSPSTP00000012889	ENSPSTP00000005903	annotation not available	Fibromodulin.	0.778
ENSPSTP00000012889	TNMD	ENSPSTP00000012889	ENSPSTP00000001874	annotation not available	Tenomodulin.	0.602
ENSPSTP00000022465	ENSPSTP00000000417	ENSPSTP00000022465	ENSPSTP00000000417	annotation not available	annotation not available	0.418
ENSPSTP00000022465	ENSPSTP00000012880	ENSPSTP00000022465	ENSPSTP00000012880	annotation not available	annotation not available	0.505