SFXN1 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SFXN1

Sideroflexin 1. (409 aa)

Predicted Functional Partners:

MTRF1

0.674

N6AMT1

0.648

GMPPA

0.587

LEPROT

0.585

ENSPSTP00000006836

0.584

FBXL4

0.583

PDZD7

0.549

ENSPSTP00000024574

0.542

RAB11A

0.532

ENSPSTP00000018078

0.532

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPSTP00000006836	ENSPSTP00000024574	ENSPSTP00000006836	ENSPSTP00000024574	annotation not available	annotation not available	0.481
ENSPSTP00000006836	FBXL4	ENSPSTP00000006836	ENSPSTP00000007192	annotation not available	F-box and leucine rich repeat protein 4.	0.536
ENSPSTP00000006836	GMPPA	ENSPSTP00000006836	ENSPSTP00000003424	annotation not available	GDP-mannose pyrophosphorylase A.	0.678
ENSPSTP00000006836	PDZD7	ENSPSTP00000006836	ENSPSTP00000008548	annotation not available	PDZ domain containing 7.	0.403
ENSPSTP00000006836	SFXN1	ENSPSTP00000006836	ENSPSTP00000001936	annotation not available	Sideroflexin 1.	0.584
ENSPSTP00000018078	RAB11A	ENSPSTP00000018078	ENSPSTP00000005993	annotation not available	RAB11A, member RAS oncogene family.	0.890
ENSPSTP00000018078	SFXN1	ENSPSTP00000018078	ENSPSTP00000001936	annotation not available	Sideroflexin 1.	0.532
ENSPSTP00000024574	ENSPSTP00000006836	ENSPSTP00000024574	ENSPSTP00000006836	annotation not available	annotation not available	0.481
ENSPSTP00000024574	FBXL4	ENSPSTP00000024574	ENSPSTP00000007192	annotation not available	F-box and leucine rich repeat protein 4.	0.536
ENSPSTP00000024574	LEPROT	ENSPSTP00000024574	ENSPSTP00000010583	annotation not available	Leptin receptor overlapping transcript.	0.541
ENSPSTP00000024574	MTRF1	ENSPSTP00000024574	ENSPSTP00000018709	annotation not available	Mitochondrial translation release factor 1.	0.584
ENSPSTP00000024574	SFXN1	ENSPSTP00000024574	ENSPSTP00000001936	annotation not available	Sideroflexin 1.	0.542
FBXL4	ENSPSTP00000006836	ENSPSTP00000007192	ENSPSTP00000006836	F-box and leucine rich repeat protein 4.	annotation not available	0.536
FBXL4	ENSPSTP00000024574	ENSPSTP00000007192	ENSPSTP00000024574	F-box and leucine rich repeat protein 4.	annotation not available	0.536
FBXL4	LEPROT	ENSPSTP00000007192	ENSPSTP00000010583	F-box and leucine rich repeat protein 4.	Leptin receptor overlapping transcript.	0.569
FBXL4	MTRF1	ENSPSTP00000007192	ENSPSTP00000018709	F-box and leucine rich repeat protein 4.	Mitochondrial translation release factor 1.	0.599
FBXL4	N6AMT1	ENSPSTP00000007192	ENSPSTP00000015421	F-box and leucine rich repeat protein 4.	N-6 adenine-specific DNA methyltransferase 1.	0.585
FBXL4	SFXN1	ENSPSTP00000007192	ENSPSTP00000001936	F-box and leucine rich repeat protein 4.	Sideroflexin 1.	0.583
GMPPA	ENSPSTP00000006836	ENSPSTP00000003424	ENSPSTP00000006836	GDP-mannose pyrophosphorylase A.	annotation not available	0.678
GMPPA	SFXN1	ENSPSTP00000003424	ENSPSTP00000001936	GDP-mannose pyrophosphorylase A.	Sideroflexin 1.	0.587