Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (272 aa)    
Predicted Functional Partners:
SNCG
Synuclein gamma.
   
 
 0.640
CPLX3
Complexin 3.
      
 0.559
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 
 0.495
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.495
NPRL3
NPR3 like, GATOR1 complex subunit.
    
 
 0.484
KCNG1
Potassium voltage-gated channel modifier subfamily G member 1.
      
 0.481
SEH1L
SEH1 like nucleoporin.
    
   0.466
WDR24
WD repeat domain 24.
    
 
 0.466
ENSPSTP00000012559
annotation not available
    
   0.466
SZT2
SZT2 subunit of KICSTOR complex.
    
   0.466
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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