Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRTO4MRT4 homolog, ribosome maturation factor. (196 aa)    
Predicted Functional Partners:
GTPBP4
GTP binding protein 4.
   
 
 0.999
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 0.997
RPF2
Ribosome production factor 2 homolog.
   
 
 0.996
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.996
GNL3
G protein nucleolar 3.
  
 
 0.995
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.995
WDR12
WD repeat domain 12.
   
 0.995
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
 
 0.994
GNL2
G protein nucleolar 2.
  
 
 0.994
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
  0.994
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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