GPC4 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

GPC4

Glypican 4. (561 aa)

Predicted Functional Partners:

ENSPSTP00000001754

0.983

ENSPSTP00000018536

0.925

FZD2

0.925

ENSPSTP00000009819

0.915

ENSPSTP00000012439

0.915

FZD6

0.911

SDC4

0.861

NOTUM

0.859

FZD9

0.853

ENSPSTP00000001713

0.843

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPSTP00000001713	ENSPSTP00000001754	ENSPSTP00000001713	ENSPSTP00000001754	annotation not available	annotation not available	0.505
ENSPSTP00000001713	ENSPSTP00000018536	ENSPSTP00000001713	ENSPSTP00000018536	annotation not available	annotation not available	0.599
ENSPSTP00000001713	FZD2	ENSPSTP00000001713	ENSPSTP00000021192	annotation not available	Frizzled class receptor 2.	0.599
ENSPSTP00000001713	FZD6	ENSPSTP00000001713	ENSPSTP00000024796	annotation not available	Frizzled class receptor 6.	0.524
ENSPSTP00000001713	GPC4	ENSPSTP00000001713	ENSPSTP00000003129	annotation not available	Glypican 4.	0.843
ENSPSTP00000001754	ENSPSTP00000001713	ENSPSTP00000001754	ENSPSTP00000001713	annotation not available	annotation not available	0.505
ENSPSTP00000001754	ENSPSTP00000018536	ENSPSTP00000001754	ENSPSTP00000018536	annotation not available	annotation not available	0.937
ENSPSTP00000001754	FZD2	ENSPSTP00000001754	ENSPSTP00000021192	annotation not available	Frizzled class receptor 2.	0.937
ENSPSTP00000001754	FZD6	ENSPSTP00000001754	ENSPSTP00000024796	annotation not available	Frizzled class receptor 6.	0.583
ENSPSTP00000001754	FZD9	ENSPSTP00000001754	ENSPSTP00000002871	annotation not available	Frizzled class receptor 9.	0.505
ENSPSTP00000001754	GPC4	ENSPSTP00000001754	ENSPSTP00000003129	annotation not available	Glypican 4.	0.983
ENSPSTP00000009819	GPC4	ENSPSTP00000009819	ENSPSTP00000003129	annotation not available	Glypican 4.	0.915
ENSPSTP00000009819	SDC4	ENSPSTP00000009819	ENSPSTP00000026498	annotation not available	Syndecan 4.	0.975
ENSPSTP00000012439	GPC4	ENSPSTP00000012439	ENSPSTP00000003129	annotation not available	Glypican 4.	0.915
ENSPSTP00000012439	SDC4	ENSPSTP00000012439	ENSPSTP00000026498	annotation not available	Syndecan 4.	0.975
ENSPSTP00000018536	ENSPSTP00000001713	ENSPSTP00000018536	ENSPSTP00000001713	annotation not available	annotation not available	0.599
ENSPSTP00000018536	ENSPSTP00000001754	ENSPSTP00000018536	ENSPSTP00000001754	annotation not available	annotation not available	0.937
ENSPSTP00000018536	FZD6	ENSPSTP00000018536	ENSPSTP00000024796	annotation not available	Frizzled class receptor 6.	0.797
ENSPSTP00000018536	FZD9	ENSPSTP00000018536	ENSPSTP00000002871	annotation not available	Frizzled class receptor 9.	0.599
ENSPSTP00000018536	GPC4	ENSPSTP00000018536	ENSPSTP00000003129	annotation not available	Glypican 4.	0.925