FAM118B protein (Pavo cristatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FAM118B

Family with sequence similarity 118 member B. (339 aa)

Predicted Functional Partners:

ENSPSTP00000018884

0.857

WDR4

0.732

MAMLD1

0.729

INTS4

0.586

ENSPSTP00000016707

0.507

LETM2

0.503

ENSPSTP00000017468

0.502

THUMPD2

0.498

COIL

0.482

ENSPSTP00000022667

0.481

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COIL	FAM118B	ENSPSTP00000005278	ENSPSTP00000003530	Coilin.	Family with sequence similarity 118 member B.	0.482
ENSPSTP00000016707	FAM118B	ENSPSTP00000016707	ENSPSTP00000003530	annotation not available	Family with sequence similarity 118 member B.	0.507
ENSPSTP00000017468	FAM118B	ENSPSTP00000017468	ENSPSTP00000003530	annotation not available	Family with sequence similarity 118 member B.	0.502
ENSPSTP00000018884	FAM118B	ENSPSTP00000018884	ENSPSTP00000003530	annotation not available	Family with sequence similarity 118 member B.	0.857
ENSPSTP00000018884	MAMLD1	ENSPSTP00000018884	ENSPSTP00000012820	annotation not available	Mastermind like domain containing 1.	0.824
ENSPSTP00000022667	FAM118B	ENSPSTP00000022667	ENSPSTP00000003530	annotation not available	Family with sequence similarity 118 member B.	0.481
ENSPSTP00000022667	LETM2	ENSPSTP00000022667	ENSPSTP00000021197	annotation not available	Leucine zipper and EF-hand containing transmembrane protein 2.	0.578
FAM118B	COIL	ENSPSTP00000003530	ENSPSTP00000005278	Family with sequence similarity 118 member B.	Coilin.	0.482
FAM118B	ENSPSTP00000016707	ENSPSTP00000003530	ENSPSTP00000016707	Family with sequence similarity 118 member B.	annotation not available	0.507
FAM118B	ENSPSTP00000017468	ENSPSTP00000003530	ENSPSTP00000017468	Family with sequence similarity 118 member B.	annotation not available	0.502
FAM118B	ENSPSTP00000018884	ENSPSTP00000003530	ENSPSTP00000018884	Family with sequence similarity 118 member B.	annotation not available	0.857
FAM118B	ENSPSTP00000022667	ENSPSTP00000003530	ENSPSTP00000022667	Family with sequence similarity 118 member B.	annotation not available	0.481
FAM118B	INTS4	ENSPSTP00000003530	ENSPSTP00000014224	Family with sequence similarity 118 member B.	Integrator complex subunit 4.	0.586
FAM118B	LETM2	ENSPSTP00000003530	ENSPSTP00000021197	Family with sequence similarity 118 member B.	Leucine zipper and EF-hand containing transmembrane protein 2.	0.503
FAM118B	MAMLD1	ENSPSTP00000003530	ENSPSTP00000012820	Family with sequence similarity 118 member B.	Mastermind like domain containing 1.	0.729
FAM118B	THUMPD2	ENSPSTP00000003530	ENSPSTP00000000717	Family with sequence similarity 118 member B.	THUMP domain containing 2.	0.498
FAM118B	WDR4	ENSPSTP00000003530	ENSPSTP00000005348	Family with sequence similarity 118 member B.	WD repeat domain 4.	0.732
INTS4	FAM118B	ENSPSTP00000014224	ENSPSTP00000003530	Integrator complex subunit 4.	Family with sequence similarity 118 member B.	0.586
LETM2	ENSPSTP00000022667	ENSPSTP00000021197	ENSPSTP00000022667	Leucine zipper and EF-hand containing transmembrane protein 2.	annotation not available	0.578
LETM2	FAM118B	ENSPSTP00000021197	ENSPSTP00000003530	Leucine zipper and EF-hand containing transmembrane protein 2.	Family with sequence similarity 118 member B.	0.503