Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC62SEC62 homolog, preprotein translocation factor. (400 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
   
 0.999
ENSPSTP00000019482
annotation not available
   
 
 0.975
SEC61G
SEC61 translocon gamma subunit.
   
 
 0.968
SPCS1
Signal peptidase complex subunit 1.
   
 
 0.946
SPCS2
Signal peptidase complex subunit 2.
   
 
 0.933
CCPG1
Cell cycle progression 1.
   
 
 0.929
ENSPSTP00000000304
annotation not available
   
 
 0.896
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.896
ENSPSTP00000023919
annotation not available
   
 
 0.896
ENSPSTP00000016433
annotation not available
    
 
 0.872
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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