RHOF protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RHOF

Ras homolog family member F, filopodia associated. (180 aa)

Predicted Functional Partners:

ITSN2

0.979

ENSPSTP00000018388

0.979

ENSPSTP00000008270

0.923

ENSPSTP00000008280

0.923

ENSPSTP00000001624

0.788

MYO9B

0.788

MYO9A

0.788

ANLN

0.785

ENSPSTP00000005561

0.752

FHDC1

0.751

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANLN	ENSPSTP00000001624	ENSPSTP00000024598	ENSPSTP00000001624	Anillin actin binding protein.	annotation not available	0.741
ANLN	ENSPSTP00000005561	ENSPSTP00000024598	ENSPSTP00000005561	Anillin actin binding protein.	annotation not available	0.680
ANLN	FHDC1	ENSPSTP00000024598	ENSPSTP00000000161	Anillin actin binding protein.	FH2 domain containing 1.	0.699
ANLN	MYO9A	ENSPSTP00000024598	ENSPSTP00000015438	Anillin actin binding protein.	Myosin IXA.	0.741
ANLN	MYO9B	ENSPSTP00000024598	ENSPSTP00000014765	Anillin actin binding protein.	Myosin IXB.	0.741
ANLN	RHOF	ENSPSTP00000024598	ENSPSTP00000004643	Anillin actin binding protein.	Ras homolog family member F, filopodia associated.	0.785
ENSPSTP00000001624	ANLN	ENSPSTP00000001624	ENSPSTP00000024598	annotation not available	Anillin actin binding protein.	0.741
ENSPSTP00000001624	FHDC1	ENSPSTP00000001624	ENSPSTP00000000161	annotation not available	FH2 domain containing 1.	0.640
ENSPSTP00000001624	MYO9A	ENSPSTP00000001624	ENSPSTP00000015438	annotation not available	Myosin IXA.	0.815
ENSPSTP00000001624	RHOF	ENSPSTP00000001624	ENSPSTP00000004643	annotation not available	Ras homolog family member F, filopodia associated.	0.788
ENSPSTP00000005561	ANLN	ENSPSTP00000005561	ENSPSTP00000024598	annotation not available	Anillin actin binding protein.	0.680
ENSPSTP00000005561	RHOF	ENSPSTP00000005561	ENSPSTP00000004643	annotation not available	Ras homolog family member F, filopodia associated.	0.752
ENSPSTP00000008270	ENSPSTP00000008280	ENSPSTP00000008270	ENSPSTP00000008280	annotation not available	annotation not available	0.645
ENSPSTP00000008270	ENSPSTP00000018388	ENSPSTP00000008270	ENSPSTP00000018388	annotation not available	annotation not available	0.953
ENSPSTP00000008270	ITSN2	ENSPSTP00000008270	ENSPSTP00000009929	annotation not available	Intersectin 2.	0.951
ENSPSTP00000008270	RHOF	ENSPSTP00000008270	ENSPSTP00000004643	annotation not available	Ras homolog family member F, filopodia associated.	0.923
ENSPSTP00000008280	ENSPSTP00000008270	ENSPSTP00000008280	ENSPSTP00000008270	annotation not available	annotation not available	0.645
ENSPSTP00000008280	ENSPSTP00000018388	ENSPSTP00000008280	ENSPSTP00000018388	annotation not available	annotation not available	0.951
ENSPSTP00000008280	ITSN2	ENSPSTP00000008280	ENSPSTP00000009929	annotation not available	Intersectin 2.	0.951
ENSPSTP00000008280	RHOF	ENSPSTP00000008280	ENSPSTP00000004643	annotation not available	Ras homolog family member F, filopodia associated.	0.923