Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCARF1Scavenger receptor class F member 1. (895 aa)    
Predicted Functional Partners:
C1QA
Complement C1q A chain.
     
  0.871
C1QC
Complement C1q C chain.
   
 
  0.871
C1QB
Complement C1q B chain.
     
  0.871
SLC46A1
Solute carrier family 46 member 1.
      
 0.717
TTR
Transthyretin.
   
  
 0.701
SLC30A5
Solute carrier family 30 member 5.
      
 0.693
TMEM216
Transmembrane protein 216.
      
 0.686
CPD
Carboxypeptidase D.
      
 0.573
BAIAP2
BAR/IMD domain containing adaptor protein 2.
      
 0.571
ANKRD22
Ankyrin repeat domain 22.
      
 0.569
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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