Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB8ARAB8A, member RAS oncogene family. (207 aa)    
Predicted Functional Partners:
MICALL2
MICAL like 2.
    
 0.952
ENSPSTP00000008874
annotation not available
     
 0.920
MICALL1
MICAL like 1.
    
 0.918
SQSTM1
Sequestosome 1.
    
 0.909
RAB14
RAB14, member RAS oncogene family.
   
 0.906
RAB8B
RAB8B, member RAS oncogene family.
     
  0.894
ENSPSTP00000010475
annotation not available
    
 0.873
ENSPSTP00000010483
annotation not available
    
 0.873
ENSPSTP00000007286
annotation not available
    
 0.872
ENSPSTP00000008219
annotation not available
    
 0.872
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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