STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1049 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.999
POLR2B
RNA polymerase II subunit B.
    
 0.998
POLR2I
RNA polymerase II subunit I.
    
 0.998
POLR2D
RNA polymerase II subunit D.
    
 0.996
ENSPSTP00000012474
annotation not available
    
 0.995
POLR2C
RNA polymerase II subunit C.
   
 0.994
POLR2F
RNA polymerase II subunit F.
   
 0.993
DDB1
Damage specific DNA binding protein 1.
    
 0.993
POLR2K
RNA polymerase II subunit K.
    
  0.992
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.