Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF12PHD finger protein 12. (1009 aa)    
Predicted Functional Partners:
GATAD1
GATA zinc finger domain containing 1.
    
 
 0.992
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
   
 
 0.985
ENSPSTP00000004631
annotation not available
    
 
 0.974
SIN3A
SIN3 transcription regulator family member A.
   
 0.969
SIN3B
SIN3 transcription regulator family member B.
   
 0.969
ARID4A
AT-rich interaction domain 4A.
    
 
 0.940
ARID4B
AT-rich interaction domain 4B.
    
 
 0.940
ENSPSTP00000026178
annotation not available
    
 
 0.940
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.933
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
 
 0.924
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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