PHF13 protein (Pavo cristatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

PHF13

PHD finger protein 13. (301 aa)

Predicted Functional Partners:

ENSPSTP00000003601

0.913

TBX20

0.913

MCRS1

0.867

BLVRA

0.858

SETD2

0.821

ENSPSTP00000018817

0.814

ENSPSTP00000012601

0.792

ENSPSTP00000012625

0.792

ENSPSTP00000015495

0.792

ENSPSTP00000015522

0.792

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLVRA	ENSPSTP00000003601	ENSPSTP00000022501	ENSPSTP00000003601	Biliverdin reductase A.	annotation not available	0.888
BLVRA	ENSPSTP00000012601	ENSPSTP00000022501	ENSPSTP00000012601	Biliverdin reductase A.	annotation not available	0.575
BLVRA	ENSPSTP00000012625	ENSPSTP00000022501	ENSPSTP00000012625	Biliverdin reductase A.	annotation not available	0.575
BLVRA	ENSPSTP00000015495	ENSPSTP00000022501	ENSPSTP00000015495	Biliverdin reductase A.	annotation not available	0.575
BLVRA	ENSPSTP00000015522	ENSPSTP00000022501	ENSPSTP00000015522	Biliverdin reductase A.	annotation not available	0.575
BLVRA	PHF13	ENSPSTP00000022501	ENSPSTP00000006641	Biliverdin reductase A.	PHD finger protein 13.	0.858
BLVRA	TBX20	ENSPSTP00000022501	ENSPSTP00000018751	Biliverdin reductase A.	T-box transcription factor 20.	0.888
ENSPSTP00000003601	BLVRA	ENSPSTP00000003601	ENSPSTP00000022501	annotation not available	Biliverdin reductase A.	0.888
ENSPSTP00000003601	ENSPSTP00000012601	ENSPSTP00000003601	ENSPSTP00000012601	annotation not available	annotation not available	0.632
ENSPSTP00000003601	ENSPSTP00000012625	ENSPSTP00000003601	ENSPSTP00000012625	annotation not available	annotation not available	0.632
ENSPSTP00000003601	ENSPSTP00000015495	ENSPSTP00000003601	ENSPSTP00000015495	annotation not available	annotation not available	0.632
ENSPSTP00000003601	ENSPSTP00000015522	ENSPSTP00000003601	ENSPSTP00000015522	annotation not available	annotation not available	0.632
ENSPSTP00000003601	PHF13	ENSPSTP00000003601	ENSPSTP00000006641	annotation not available	PHD finger protein 13.	0.913
ENSPSTP00000012601	BLVRA	ENSPSTP00000012601	ENSPSTP00000022501	annotation not available	Biliverdin reductase A.	0.575
ENSPSTP00000012601	ENSPSTP00000003601	ENSPSTP00000012601	ENSPSTP00000003601	annotation not available	annotation not available	0.632
ENSPSTP00000012601	PHF13	ENSPSTP00000012601	ENSPSTP00000006641	annotation not available	PHD finger protein 13.	0.792
ENSPSTP00000012601	TBX20	ENSPSTP00000012601	ENSPSTP00000018751	annotation not available	T-box transcription factor 20.	0.632
ENSPSTP00000012625	BLVRA	ENSPSTP00000012625	ENSPSTP00000022501	annotation not available	Biliverdin reductase A.	0.575
ENSPSTP00000012625	ENSPSTP00000003601	ENSPSTP00000012625	ENSPSTP00000003601	annotation not available	annotation not available	0.632
ENSPSTP00000012625	PHF13	ENSPSTP00000012625	ENSPSTP00000006641	annotation not available	PHD finger protein 13.	0.792