SCG5 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SCG5

Secretogranin V. (170 aa)

Predicted Functional Partners:

SCG2

0.646

STMN1

0.571

ENSPSTP00000012198

0.568

ENSPSTP00000008716

0.541

PCSK7

0.538

PCSK1

0.487

ENSPSTP00000001256

0.475

ENSPSTP00000006173

0.475

ENSPSTP00000018800

0.475

ENSPSTP00000026065

0.475

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPSTP00000001256	SCG2	ENSPSTP00000001256	ENSPSTP00000016299	annotation not available	Secretogranin II.	0.834
ENSPSTP00000001256	SCG5	ENSPSTP00000001256	ENSPSTP00000007168	annotation not available	Secretogranin V.	0.475
ENSPSTP00000006173	SCG2	ENSPSTP00000006173	ENSPSTP00000016299	annotation not available	Secretogranin II.	0.516
ENSPSTP00000006173	SCG5	ENSPSTP00000006173	ENSPSTP00000007168	annotation not available	Secretogranin V.	0.475
ENSPSTP00000008716	SCG5	ENSPSTP00000008716	ENSPSTP00000007168	annotation not available	Secretogranin V.	0.541
ENSPSTP00000012198	SCG2	ENSPSTP00000012198	ENSPSTP00000016299	annotation not available	Secretogranin II.	0.404
ENSPSTP00000012198	SCG5	ENSPSTP00000012198	ENSPSTP00000007168	annotation not available	Secretogranin V.	0.568
ENSPSTP00000018800	SCG2	ENSPSTP00000018800	ENSPSTP00000016299	annotation not available	Secretogranin II.	0.516
ENSPSTP00000018800	SCG5	ENSPSTP00000018800	ENSPSTP00000007168	annotation not available	Secretogranin V.	0.475
ENSPSTP00000026065	SCG2	ENSPSTP00000026065	ENSPSTP00000016299	annotation not available	Secretogranin II.	0.834
ENSPSTP00000026065	SCG5	ENSPSTP00000026065	ENSPSTP00000007168	annotation not available	Secretogranin V.	0.475
PCSK1	SCG5	ENSPSTP00000008693	ENSPSTP00000007168	Proprotein convertase subtilisin/kexin type 1.	Secretogranin V.	0.487
PCSK7	SCG5	ENSPSTP00000015630	ENSPSTP00000007168	Proprotein convertase subtilisin/kexin type 7.	Secretogranin V.	0.538
SCG2	ENSPSTP00000001256	ENSPSTP00000016299	ENSPSTP00000001256	Secretogranin II.	annotation not available	0.834
SCG2	ENSPSTP00000006173	ENSPSTP00000016299	ENSPSTP00000006173	Secretogranin II.	annotation not available	0.516
SCG2	ENSPSTP00000012198	ENSPSTP00000016299	ENSPSTP00000012198	Secretogranin II.	annotation not available	0.404
SCG2	ENSPSTP00000018800	ENSPSTP00000016299	ENSPSTP00000018800	Secretogranin II.	annotation not available	0.516
SCG2	ENSPSTP00000026065	ENSPSTP00000016299	ENSPSTP00000026065	Secretogranin II.	annotation not available	0.834
SCG2	SCG5	ENSPSTP00000016299	ENSPSTP00000007168	Secretogranin II.	Secretogranin V.	0.646
SCG5	ENSPSTP00000001256	ENSPSTP00000007168	ENSPSTP00000001256	Secretogranin V.	annotation not available	0.475