STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (358 aa)    
Predicted Functional Partners:
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.999
DDB1
Damage specific DNA binding protein 1.
    
 0.999
ENSPSTP00000003161
annotation not available
    
 
 0.994
ENSPSTP00000012474
annotation not available
    
 0.982
DDB2
Damage specific DNA binding protein 2.
    
 0.976
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.973
XPC
XPC complex subunit, DNA damage recognition and repair factor.
     
 0.970
DCAF7
DDB1 and CUL4 associated factor 7.
     
 0.969
DTL
Denticleless E3 ubiquitin protein ligase homolog.
     
 0.969
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
     
 0.968
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.