STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS54VPS54 subunit of GARP complex. (621 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
   
 0.999
VPS51
VPS51 subunit of GARP complex.
   
 0.985
ENSPSTP00000004480
annotation not available
    
 0.953
EIPR1
EARP complex and GARP complex interacting protein 1.
    
 0.953
ENSPSTP00000009861
annotation not available
    
 0.900
STX6
Syntaxin 6.
    
 0.874
ENSPSTP00000000260
annotation not available
    
 0.858
COG6
Component of oligomeric golgi complex 6.
    
 0.858
COG7
Component of oligomeric golgi complex 7.
     
 0.850
STX8
Syntaxin 8.
    
 0.833
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.