LIMD1 protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LIMD1

LIM domains containing 1. (575 aa)

Predicted Functional Partners:

DDX6

0.947

AGO2

0.946

DICER1

0.944

LATS2

0.910

ENSPSTP00000021066

0.885

SAV1

0.879

ENSPSTP00000010372

0.876

ENSPSTP00000010380

0.876

HAUS8

0.843

LPP

0.837

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGO2	DDX6	ENSPSTP00000010636	ENSPSTP00000013575	Argonaute RISC catalytic component 2.	DEAD-box helicase 6.	0.991
AGO2	DICER1	ENSPSTP00000010636	ENSPSTP00000000697	Argonaute RISC catalytic component 2.	Dicer 1, ribonuclease III.	0.999
AGO2	LIMD1	ENSPSTP00000010636	ENSPSTP00000007756	Argonaute RISC catalytic component 2.	LIM domains containing 1.	0.946
DDX6	AGO2	ENSPSTP00000013575	ENSPSTP00000010636	DEAD-box helicase 6.	Argonaute RISC catalytic component 2.	0.991
DDX6	DICER1	ENSPSTP00000013575	ENSPSTP00000000697	DEAD-box helicase 6.	Dicer 1, ribonuclease III.	0.974
DDX6	LIMD1	ENSPSTP00000013575	ENSPSTP00000007756	DEAD-box helicase 6.	LIM domains containing 1.	0.947
DDX6	LPP	ENSPSTP00000013575	ENSPSTP00000005096	DEAD-box helicase 6.	LIM domain containing preferred translocation partner in lipoma.	0.662
DICER1	AGO2	ENSPSTP00000000697	ENSPSTP00000010636	Dicer 1, ribonuclease III.	Argonaute RISC catalytic component 2.	0.999
DICER1	DDX6	ENSPSTP00000000697	ENSPSTP00000013575	Dicer 1, ribonuclease III.	DEAD-box helicase 6.	0.974
DICER1	LIMD1	ENSPSTP00000000697	ENSPSTP00000007756	Dicer 1, ribonuclease III.	LIM domains containing 1.	0.944
DICER1	LPP	ENSPSTP00000000697	ENSPSTP00000005096	Dicer 1, ribonuclease III.	LIM domain containing preferred translocation partner in lipoma.	0.665
ENSPSTP00000010372	ENSPSTP00000010380	ENSPSTP00000010372	ENSPSTP00000010380	annotation not available	annotation not available	0.781
ENSPSTP00000010372	LATS2	ENSPSTP00000010372	ENSPSTP00000019446	annotation not available	Large tumor suppressor kinase 2.	0.830
ENSPSTP00000010372	LIMD1	ENSPSTP00000010372	ENSPSTP00000007756	annotation not available	LIM domains containing 1.	0.876
ENSPSTP00000010372	LPP	ENSPSTP00000010372	ENSPSTP00000005096	annotation not available	LIM domain containing preferred translocation partner in lipoma.	0.608
ENSPSTP00000010372	SAV1	ENSPSTP00000010372	ENSPSTP00000003611	annotation not available	Salvador family WW domain containing protein 1.	0.951
ENSPSTP00000010380	ENSPSTP00000010372	ENSPSTP00000010380	ENSPSTP00000010372	annotation not available	annotation not available	0.781
ENSPSTP00000010380	LATS2	ENSPSTP00000010380	ENSPSTP00000019446	annotation not available	Large tumor suppressor kinase 2.	0.831
ENSPSTP00000010380	LIMD1	ENSPSTP00000010380	ENSPSTP00000007756	annotation not available	LIM domains containing 1.	0.876
ENSPSTP00000010380	LPP	ENSPSTP00000010380	ENSPSTP00000005096	annotation not available	LIM domain containing preferred translocation partner in lipoma.	0.608