STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcrCUndecaprenyl-diphosphatase BcrC. (278 aa)    
Predicted Functional Partners:
fadK
Short-chain-fatty-acid--CoA ligase.
    
 0.964
SCJ60624.1
V-type ATP synthase subunit C.
    
 0.930
ntpC
V-type sodium pump subunit C.
    
 0.930
ugpQ
Glycerophosphoryl diester phosphodiesterase.
 
 0.916
rplF
BL10.
    
  0.915
SCJ60680.1
V-type ATP synthase subunit F.
    
 0.892
ntpG
V-type sodium pump subunit G.
    
 0.892
uppS
Undecaprenyl pyrophosphate synthase.
 
 
 0.883
uppP
Undecaprenyl-diphosphatase.
  
 
 0.878
SCJ60644.1
V-type ATP synthase subunit I.
    
 0.870
Your Current Organism:
uncultured Anaerotruncus sp.
NCBI taxonomy Id: 905011
Other names: u. Anaerotruncus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.