STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS20Vacuolar protein sorting protein 20. (308 aa)    
Predicted Functional Partners:
VPS4
Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.
    
 0.999
VPS36
Vacuolar protein sorting 36.
    
 0.997
VPS22
Vacuolar protein sorting 22.
    
 0.997
VPS24
Vacuolar protein sorting protein 24.
    
 0.993
VPS32
Vacuolar protein sorting protein 32.
    
 0.990
VPS28
Vacuolar sorting protein 28; Belongs to the VPS28 family.
   
 0.978
L1I6G4_GUITC
Uncharacterized protein.
    
 0.948
L1IG09_GUITC
Uncharacterized protein.
    
 0.948
L1IGC1_GUITC
Uncharacterized protein.
    
 0.948
L1IRR7_GUITC
Uncharacterized protein.
    
 0.930
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.