L1I6N0_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1I6N0_GUITC

Uncharacterized protein. (1389 aa)

Predicted Functional Partners:

L1JQ90_GUITC

0.867

L1JVY9_GUITC

0.598

L1I915_GUITC

0.579

L1II59_GUITC

0.579

L1J0G9_GUITC

0.579

L1K2W8_GUITC

0.556

L1J3Y1_GUITC

0.545

L1J540_GUITC

0.545

L1I8G5_GUITC

0.524

L1IP31_GUITC

0.524

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1I6N0_GUITC	L1I8G5_GUITC	L1I6N0	L1I8G5	Uncharacterized protein.	Uncharacterized protein.	0.524
L1I6N0_GUITC	L1I915_GUITC	L1I6N0	L1I915	Uncharacterized protein.	Uncharacterized protein.	0.579
L1I6N0_GUITC	L1II59_GUITC	L1I6N0	L1II59	Uncharacterized protein.	Putative amylase, secreted.	0.579
L1I6N0_GUITC	L1IP31_GUITC	L1I6N0	L1IP31	Uncharacterized protein.	Roc domain-containing protein.	0.524
L1I6N0_GUITC	L1J0G9_GUITC	L1I6N0	L1J0G9	Uncharacterized protein.	Uncharacterized protein.	0.579
L1I6N0_GUITC	L1J3Y1_GUITC	L1I6N0	L1J3Y1	Uncharacterized protein.	ANF_receptor domain-containing protein.	0.545
L1I6N0_GUITC	L1J540_GUITC	L1I6N0	L1J540	Uncharacterized protein.	ANF_receptor domain-containing protein.	0.545
L1I6N0_GUITC	L1JQ90_GUITC	L1I6N0	L1JQ90	Uncharacterized protein.	Uncharacterized protein.	0.867
L1I6N0_GUITC	L1JVY9_GUITC	L1I6N0	L1JVY9	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.598
L1I6N0_GUITC	L1K2W8_GUITC	L1I6N0	L1K2W8	Uncharacterized protein.	Uncharacterized protein.	0.556
L1I8G5_GUITC	L1I6N0_GUITC	L1I8G5	L1I6N0	Uncharacterized protein.	Uncharacterized protein.	0.524
L1I8G5_GUITC	L1I915_GUITC	L1I8G5	L1I915	Uncharacterized protein.	Uncharacterized protein.	0.998
L1I8G5_GUITC	L1II59_GUITC	L1I8G5	L1II59	Uncharacterized protein.	Putative amylase, secreted.	0.998
L1I8G5_GUITC	L1IP31_GUITC	L1I8G5	L1IP31	Uncharacterized protein.	Roc domain-containing protein.	0.981
L1I8G5_GUITC	L1J0G9_GUITC	L1I8G5	L1J0G9	Uncharacterized protein.	Uncharacterized protein.	0.998
L1I8G5_GUITC	L1JQ90_GUITC	L1I8G5	L1JQ90	Uncharacterized protein.	Uncharacterized protein.	0.981
L1I8G5_GUITC	L1JVY9_GUITC	L1I8G5	L1JVY9	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.986
L1I8G5_GUITC	L1K2W8_GUITC	L1I8G5	L1K2W8	Uncharacterized protein.	Uncharacterized protein.	0.551
L1I915_GUITC	L1I6N0_GUITC	L1I915	L1I6N0	Uncharacterized protein.	Uncharacterized protein.	0.579
L1I915_GUITC	L1I8G5_GUITC	L1I915	L1I8G5	Uncharacterized protein.	Uncharacterized protein.	0.998