STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1I907_GUITCHelicase ATP-binding domain-containing protein; Belongs to the DEAD box helicase family. (348 aa)    
Predicted Functional Partners:
L1JVQ2_GUITC
SF3b1 domain-containing protein.
   
 0.999
L1IEZ6_GUITC
Splicing factor subunit; Belongs to the SF3B5 family.
    
 0.980
L1JPP4_GUITC
Uncharacterized protein.
    
 0.973
L1J2M9_GUITC
Matrin-type domain-containing protein.
    
 0.952
L1JNA9_GUITC
Uncharacterized protein.
    
 0.952
L1JKJ8_GUITC
CPSF_A domain-containing protein.
   
 0.932
L1JLK5_GUITC
CPSF_A domain-containing protein.
   
 0.932
L1JS98_GUITC
Uncharacterized protein.
   
 0.932
L1I4J3_GUITC
Uncharacterized protein.
    
 0.920
L1JBF4_GUITC
PSP domain-containing protein.
   
 0.913
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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