STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1IDU6_GUITCPH domain-containing protein. (1098 aa)    
Predicted Functional Partners:
L1JJ17_GUITC
Helicase ATP-binding domain-containing protein.
    
 0.767
POLD2
DNA polymerase delta small subunit.
    
 0.670
L1I8G5_GUITC
Uncharacterized protein.
   
 0.655
L1IP31_GUITC
Roc domain-containing protein.
   
 0.655
L1IYH1_GUITC
EF-hand domain-containing protein.
   
 0.655
L1JCD1_GUITC
EF-hand domain-containing protein.
   
 0.655
Mus81
Mus81 endonuclease, DNA recombination, crossover formation in meiosis and mitosis.
    
 0.643
L1JND5_GUITC
Uncharacterized protein.
   
 0.622
L1JMX4_GUITC
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.616
L1I9L9_GUITC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.604
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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