STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1IJW3_GUITCHMG box domain-containing protein. (75 aa)    
Predicted Functional Partners:
L1JBP9_GUITC
Uncharacterized protein; Belongs to the actin family.
    
 0.726
RpoTm
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.690
L1IMD2_GUITC
RuvB-like helicase; Belongs to the RuvB family.
    
 0.686
L1JU91_GUITC
Uncharacterized protein; Belongs to the actin family.
   
 0.685
L1JA51_GUITC
Uncharacterized protein; Belongs to the actin family.
    
 0.679
L1ICB9_GUITC
BSD domain-containing protein.
    
 0.661
L1J604_GUITC
Uncharacterized protein.
    
 0.652
ERCC3
ERCC3/XPB/SSL2/Rad25 nucleotide excision repair.
   
 0.652
L1JNS9_GUITC
Uncharacterized protein.
    
 0.649
TFIIH
SSL1 transcription factor & nucleotide excision repair.
    
 0.645
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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