STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XPGERCC5/XPG/Rad2 nucleotide excision repair. (118 aa)    
Predicted Functional Partners:
L1ICB9_GUITC
BSD domain-containing protein.
    
 0.995
L1J0R3_GUITC
3'-5' exonuclease domain-containing protein.
  
 0.993
ERCC3
ERCC3/XPB/SSL2/Rad25 nucleotide excision repair.
   
 0.991
L1J403_GUITC
Uncharacterized protein.
   
 0.989
ERCC2
ERCC2/XPD/Rad3 nucleotide excision repair.
   
 0.982
Mus81
Mus81 endonuclease, DNA recombination, crossover formation in meiosis and mitosis.
   
 0.968
TFIIH
SSL1 transcription factor & nucleotide excision repair.
    
 0.965
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.958
L1JJ17_GUITC
Helicase ATP-binding domain-containing protein.
   
 0.951
L1JUN8_GUITC
Lactamase_B domain-containing protein.
  
 0.927
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.