STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1IR33_GUITCtRNA pseudouridine synthase. (321 aa)    
Predicted Functional Partners:
L1IWU4_GUITC
IGPS domain-containing protein.
     
 0.716
L1J699_GUITC
IGPS domain-containing protein.
     
 0.716
L1K448_GUITC
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.644
L1J232_GUITC
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.641
L1IWD0_GUITC
PALP domain-containing protein.
     
 0.637
L1IH90_GUITC
RPOLD domain-containing protein.
  
  
 0.560
L1JYV0_GUITC
RPOLD domain-containing protein.
  
  
 0.560
L1JRY1_GUITC
Uncharacterized protein.
   
 
 0.541
L1JUH6_GUITC
Rhodanese domain-containing protein.
   
 
 0.510
L1JC08_GUITC
IGPS domain-containing protein.
     
 0.472
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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