STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1IR38_GUITCBin3-type SAM domain-containing protein. (230 aa)    
Predicted Functional Partners:
L1JEK9_GUITC
RRM domain-containing protein.
    
 
 0.585
L1I998_GUITC
Uncharacterized protein.
    
 
 0.488
L1JDB3_GUITC
Uncharacterized protein.
    
 
 0.460
RPL18e
Large subunit ribosomal protein L18e, cytoplasmic.
    
 
 0.457
L1JY65_GUITC
Nop domain-containing protein.
    
 
 0.453
L1IWI8_GUITC
Sm domain-containing protein.
    
   0.433
L1IK86_GUITC
Uncharacterized protein.
    
 
 0.411
L1IZI4_GUITC
Uncharacterized protein.
   
  
 0.405
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 
 0.402
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.