L1IRC8_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1IRC8_GUITC

Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (373 aa)

Predicted Functional Partners:

L1IRA6_GUITC

0.998

L1IAH5_GUITC

0.997

L1IGM8_GUITC

0.993

L1IUQ4_GUITC

0.973

L1ING3_GUITC

0.956

L1INW5_GUITC

0.956

L1JN21_GUITC

0.956

L1JWN9_GUITC

0.956

L1IH53_GUITC

0.939

L1JPS0_GUITC

0.937

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1IAH5_GUITC	L1IGM8_GUITC	L1IAH5	L1IGM8	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.975
L1IAH5_GUITC	L1IH53_GUITC	L1IAH5	L1IH53	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.769
L1IAH5_GUITC	L1IRA6_GUITC	L1IAH5	L1IRA6	Amidohydro-rel domain-containing protein.	OMPdecase domain-containing protein.	0.723
L1IAH5_GUITC	L1IRC8_GUITC	L1IAH5	L1IRC8	Amidohydro-rel domain-containing protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.997
L1IAH5_GUITC	L1JPS0_GUITC	L1IAH5	L1JPS0	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.553
L1IGM8_GUITC	L1IAH5_GUITC	L1IGM8	L1IAH5	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.975
L1IGM8_GUITC	L1ING3_GUITC	L1IGM8	L1ING3	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.703
L1IGM8_GUITC	L1INW5_GUITC	L1IGM8	L1INW5	Uncharacterized protein.	NAD_binding_1 domain-containing protein.	0.702
L1IGM8_GUITC	L1IRA6_GUITC	L1IGM8	L1IRA6	Uncharacterized protein.	OMPdecase domain-containing protein.	0.942
L1IGM8_GUITC	L1IRC8_GUITC	L1IGM8	L1IRC8	Uncharacterized protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.993
L1IGM8_GUITC	L1IUQ4_GUITC	L1IGM8	L1IUQ4	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.782
L1IGM8_GUITC	L1JN21_GUITC	L1IGM8	L1JN21	Uncharacterized protein.	Uncharacterized protein.	0.702
L1IGM8_GUITC	L1JPS0_GUITC	L1IGM8	L1JPS0	Uncharacterized protein.	Uncharacterized protein.	0.838
L1IGM8_GUITC	L1JWN9_GUITC	L1IGM8	L1JWN9	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.703
L1IH53_GUITC	L1IAH5_GUITC	L1IH53	L1IAH5	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.769
L1IH53_GUITC	L1ING3_GUITC	L1IH53	L1ING3	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.703
L1IH53_GUITC	L1INW5_GUITC	L1IH53	L1INW5	Uncharacterized protein.	NAD_binding_1 domain-containing protein.	0.702
L1IH53_GUITC	L1IRA6_GUITC	L1IH53	L1IRA6	Uncharacterized protein.	OMPdecase domain-containing protein.	0.942
L1IH53_GUITC	L1IRC8_GUITC	L1IH53	L1IRC8	Uncharacterized protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.939
L1IH53_GUITC	L1IUQ4_GUITC	L1IH53	L1IUQ4	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.782