L1IST3_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Score

L1IST3_GUITC

ANK_REP_REGION domain-containing protein. (347 aa)

Predicted Functional Partners:

L1I915_GUITC

0.937

L1II59_GUITC

0.937

L1J0G9_GUITC

0.937

L1JQ90_GUITC

0.937

L1JVY9_GUITC

0.877

L1J3G8_GUITC

0.806

L1JDG1_GUITC

0.806

L1JDM5_GUITC

0.806

L1JQP4_GUITC

0.806

L1JEB3_GUITC

0.799

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1I915_GUITC	L1IST3_GUITC	L1I915	L1IST3	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.937
L1I915_GUITC	L1JEB3_GUITC	L1I915	L1JEB3	Uncharacterized protein.	Uncharacterized protein.	0.765
L1I915_GUITC	L1JQ90_GUITC	L1I915	L1JQ90	Uncharacterized protein.	Uncharacterized protein.	0.461
L1I915_GUITC	L1JVY9_GUITC	L1I915	L1JVY9	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.473
L1II59_GUITC	L1IST3_GUITC	L1II59	L1IST3	Putative amylase, secreted.	ANK_REP_REGION domain-containing protein.	0.937
L1II59_GUITC	L1JEB3_GUITC	L1II59	L1JEB3	Putative amylase, secreted.	Uncharacterized protein.	0.765
L1II59_GUITC	L1JQ90_GUITC	L1II59	L1JQ90	Putative amylase, secreted.	Uncharacterized protein.	0.461
L1II59_GUITC	L1JVY9_GUITC	L1II59	L1JVY9	Putative amylase, secreted.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.473
L1IST3_GUITC	L1I915_GUITC	L1IST3	L1I915	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.937
L1IST3_GUITC	L1II59_GUITC	L1IST3	L1II59	ANK_REP_REGION domain-containing protein.	Putative amylase, secreted.	0.937
L1IST3_GUITC	L1J0G9_GUITC	L1IST3	L1J0G9	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.937
L1IST3_GUITC	L1J3G8_GUITC	L1IST3	L1J3G8	ANK_REP_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.806
L1IST3_GUITC	L1JDG1_GUITC	L1IST3	L1JDG1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.806
L1IST3_GUITC	L1JDM5_GUITC	L1IST3	L1JDM5	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.806
L1IST3_GUITC	L1JEB3_GUITC	L1IST3	L1JEB3	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.799
L1IST3_GUITC	L1JQ90_GUITC	L1IST3	L1JQ90	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.937
L1IST3_GUITC	L1JQP4_GUITC	L1IST3	L1JQP4	ANK_REP_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.806
L1IST3_GUITC	L1JVY9_GUITC	L1IST3	L1JVY9	ANK_REP_REGION domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.877
L1J0G9_GUITC	L1IST3_GUITC	L1J0G9	L1IST3	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.937
L1J0G9_GUITC	L1JEB3_GUITC	L1J0G9	L1JEB3	Uncharacterized protein.	Uncharacterized protein.	0.765

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Network Stats

number of nodes:

10

number of edges:

21

average node degree:

4.2

avg. local clustering coefficient:

0.873

expected number of edges:

9

PPI enrichment p-value:

0.000652

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0040019

Positive regulation of embryonic development

2 of 6

2.88

0.81

0.0391

GO:0045039

Protein insertion into mitochondrial inner membrane

2 of 8

2.76

0.8

0.0391

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005743

Mitochondrial inner membrane

4 of 419

1.34

0.72

0.0279

GO:0098798

Mitochondrial protein-containing complex

3 of 267

1.41

0.65

0.0463

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:6513

Mixed, incl. Tim10-like, and Mitochondrial intermembrane space import and assembly protein 40

4 of 17

2.73

3.46

5.49e-07

CL:6519

TIM22 mitochondrial import inner membrane insertion complex, and Tim10-like

3 of 5

3.14

2.98

5.61e-06

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-1268020

Mitochondrial protein import

3 of 47

2.16

1.47

0.0019

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0042719

Mitochondrial intermembrane space protein transporter complex

2 of 5

2.96

1.46

0.0028

GOCC:0098798

Mitochondrial protein complex

4 of 228

1.6

1.2

0.0028

GOCC:0005740

Mitochondrial envelope

4 of 383

1.38

1.05

0.0034

GOCC:0031967

Organelle envelope

5 of 547

1.32

1.03

0.0028

GOCC:0071013

Catalytic step 2 spliceosome

2 of 37

2.09

0.92

0.0215

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0811

Translocation

2 of 20

2.36

1.05

0.0132

KW-0496

Mitochondrion

3 of 160

1.63

0.94

0.0132

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF10312

Conserved mid region of cactin

2 of 2

3.36

1.51

0.0023

PF04621

PEA3 subfamily ETS-domain transcription factor N terminal domain

2 of 4

3.06

1.45

0.0029

PF02953

Tim10/DDP family zinc finger

2 of 6

2.88

1.39

0.0036

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR019134

Splicing factor Cactin, C-terminal

2 of 2

3.36

1.23

0.0073

IPR018816

Splicing factor cactin, central domain

2 of 2

3.36

1.23

0.0073

IPR006715

PEA3-type ETS-domain transcription factor, N-terminal

2 of 4

3.06

1.22

0.0073

IPR035427

Tim10-like domain superfamily

2 of 6

2.88

1.18

0.0085

IPR004217

Tim10-like

2 of 6

2.88

1.18

0.0085

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM01050

Cactus-binding C-terminus of cactin protein

2 of 3

3.18

1.65

0.0013

SM00413

Erythroblast transformation specific domain

2 of 32

2.15

0.8

0.0372

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