STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1ITH4_GUITCPeptidase_M24 domain-containing protein. (378 aa)    
Predicted Functional Partners:
UBQ_RPS30e
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.995
RPL23Ae
Large subunit ribosomal protein L23Ae, cytoplasmic; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.979
L1JWV3_GUITC
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.979
RPL5e
Large subunit ribosomal protein L5e, cytoplasmic.
  
 
 0.977
L1IW17_GUITC
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.972
RPL26e
Large subunit ribosomal protein L26e, cytoplasmic.
  
 
 0.971
P0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.971
L1IEW1_GUITC
Uncharacterized protein.
   
 
 0.969
RPL11e
Large subunit ribosomal protein L11e, cytoplasmic; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.969
L1JLN4_GUITC
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
  
 
 0.969
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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