STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP96-98Nup96-98, nuclear pore complex component. (1017 aa)    
Predicted Functional Partners:
L1IL99_GUITC
RanBD1 domain-containing protein.
   
 0.998
NUP50
Nup50, nuclear pore complex component.
   
 0.998
SEC13
Secretory protein Sec13; Belongs to the WD repeat SEC13 family.
    
 0.996
L1JKX9_GUITC
HTH OST-type domain-containing protein.
   
 0.996
SEH1
Seh1, nuclear pore complex component; Belongs to the WD repeat SEC13 family.
   
 0.996
RAE1
Rae1, nuclear pore complex component.
   
 0.979
L1IT71_GUITC
WD_REPEATS_REGION domain-containing protein.
   
 0.979
L1JAT2_GUITC
Uncharacterized protein.
   
 0.979
RAE1_2
Putative Rae1, nuclear pore complex component.
   
 0.979
NUP155
Nup155, nuclear pore complex component.
   
 0.969
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.