L1IUZ2_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1IUZ2_GUITC

Methyltransf_11 domain-containing protein. (212 aa)

Predicted Functional Partners:

L1IUN2_GUITC

0.662

L1IKB1_GUITC

0.638

L1IQU7_GUITC

0.612

RPS2e

0.612

RPS24e

0.603

RPS4e

0.599

RPS15Ae

0.599

L1JHC7_GUITC

0.599

RPS6e

0.597

RPS8e

0.597

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1IKB1_GUITC	L1IQU7_GUITC	L1IKB1	L1IQU7	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.966
L1IKB1_GUITC	L1IUZ2_GUITC	L1IKB1	L1IUZ2	Uncharacterized protein.	Methyltransf_11 domain-containing protein.	0.638
L1IKB1_GUITC	L1JHC7_GUITC	L1IKB1	L1JHC7	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.998
L1IKB1_GUITC	RPS15Ae	L1IKB1	L1JCY6	Uncharacterized protein.	Small subunit ribosomal protein S15Ae, cytoplasmic; Belongs to the universal ribosomal protein uS8 family.	0.993
L1IKB1_GUITC	RPS24e	L1IKB1	L1ITS3	Uncharacterized protein.	Small subunit ribosomal protein S24e, cytoplasmic.	0.995
L1IKB1_GUITC	RPS2e	L1IKB1	L1JUC7	Uncharacterized protein.	Small subunit ribosomal protein S2e, cytoplasmic; Belongs to the universal ribosomal protein uS5 family.	0.999
L1IKB1_GUITC	RPS4e	L1IKB1	L1J6G7	Uncharacterized protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.997
L1IKB1_GUITC	RPS6e	L1IKB1	L1IVH4	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
L1IKB1_GUITC	RPS8e	L1IKB1	L1J4P7	Uncharacterized protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.997
L1IQU7_GUITC	L1IKB1_GUITC	L1IQU7	L1IKB1	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.966
L1IQU7_GUITC	L1IUZ2_GUITC	L1IQU7	L1IUZ2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Methyltransf_11 domain-containing protein.	0.612
L1IQU7_GUITC	L1JHC7_GUITC	L1IQU7	L1JHC7	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.997
L1IQU7_GUITC	RPS15Ae	L1IQU7	L1JCY6	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Small subunit ribosomal protein S15Ae, cytoplasmic; Belongs to the universal ribosomal protein uS8 family.	0.999
L1IQU7_GUITC	RPS24e	L1IQU7	L1ITS3	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Small subunit ribosomal protein S24e, cytoplasmic.	0.997
L1IQU7_GUITC	RPS4e	L1IQU7	L1J6G7	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.997
L1IQU7_GUITC	RPS6e	L1IQU7	L1IVH4	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.996
L1IQU7_GUITC	RPS8e	L1IQU7	L1J4P7	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.997
L1IUN2_GUITC	L1IUZ2_GUITC	L1IUN2	L1IUZ2	P450 superfamily protein; Belongs to the cytochrome P450 family.	Methyltransf_11 domain-containing protein.	0.662
L1IUN2_GUITC	L1JHC7_GUITC	L1IUN2	L1JHC7	P450 superfamily protein; Belongs to the cytochrome P450 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.407
L1IUZ2_GUITC	L1IKB1_GUITC	L1IUZ2	L1IKB1	Methyltransf_11 domain-containing protein.	Uncharacterized protein.	0.638