STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS41Vacuolar protein sorting 41. (966 aa)    
Predicted Functional Partners:
L1JRP4_GUITC
Pep3_Vps18 domain-containing protein.
  
 
 0.999
VPS11
Vacuolar protein sorting 11.
   
 0.998
L1JXL1_GUITC
Uncharacterized protein; Belongs to the VPS16 family.
    
 0.998
VPS39
Vacuolar protein sorting 39.
   
 0.997
L1ITE1_GUITC
Uncharacterized protein.
  
 
 
 0.995
VTI1
Vesicle transport through interaction with t-snares 1.
    
 
 0.994
VPS33B
Vacuolar protein sorting 33B; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.975
VPS33A
Vacuolar protein sorting 33A; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.975
L1J0F4_GUITC
Longin domain-containing protein.
    
 
 0.947
YKT6
Ykt6 protein; Belongs to the synaptobrevin family.
    
 
 0.947
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.