STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1IX54_GUITCTPR_REGION domain-containing protein. (568 aa)    
Predicted Functional Partners:
L1JKX9_GUITC
HTH OST-type domain-containing protein.
   
 0.999
L1IL99_GUITC
RanBD1 domain-containing protein.
   
 0.997
NUP50
Nup50, nuclear pore complex component.
   
 0.997
NUP75/85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.981
SEH1
Seh1, nuclear pore complex component; Belongs to the WD repeat SEC13 family.
    
 0.981
NUP155
Nup155, nuclear pore complex component.
    
 0.976
NUP54
Nup54, nuclear pore complex component.
    
 0.972
SEC13
Secretory protein Sec13; Belongs to the WD repeat SEC13 family.
    
 0.970
NUP153
Nup153, nuclear pore complex component.
    
 0.969
L1JET4_GUITC
NTF2 domain-containing protein.
   
 0.967
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.