STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1IY01_GUITCMatrin-type domain-containing protein. (431 aa)    
Predicted Functional Partners:
L1JY65_GUITC
Nop domain-containing protein.
    
 0.970
L1K1Z1_GUITC
Uncharacterized protein.
    
 0.946
L1JVP9_GUITC
Sm domain-containing protein.
    
 0.938
L1ILM1_GUITC
U1-type domain-containing protein.
   
 0.928
L1ICQ1_GUITC
Uncharacterized protein.
   
 0.922
L1JVQ2_GUITC
SF3b1 domain-containing protein.
    
 
 0.903
L1IML0_GUITC
Uncharacterized protein.
    
 0.900
L1IBH4_GUITC
SEC63 domain-containing protein.
    
 
 0.899
L1K0L5_GUITC
Uncharacterized protein.
    
 
 0.899
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.887
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.