STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1J261_GUITCAminotran_5 domain-containing protein. (480 aa)    
Predicted Functional Partners:
L1IL96_GUITC
Uncharacterized protein.
   
  
 0.593
L1IGD6_GUITC
Rhodanese domain-containing protein.
  
 
 0.535
L1JUZ6_GUITC
Uncharacterized protein.
  
 
 0.535
L1IWW5_GUITC
Uncharacterized protein.
  
  
 0.531
L1J6E3_GUITC
Elp3 domain-containing protein.
   
 
 0.515
L1JSF9_GUITC
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.515
L1JVN9_GUITC
Uncharacterized protein.
  
  
 0.514
L1JLR0_GUITC
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
  
  
 0.487
L1JP15_GUITC
Uncharacterized protein.
  
  
 0.487
L1IDP5_GUITC
Uncharacterized protein.
  
  
 0.486
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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