L1J3J4_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1J3J4_GUITC

Uncharacterized protein. (1943 aa)

Predicted Functional Partners:

L1JAQ1_GUITC

0.911

L1JVY9_GUITC

0.887

L1IBM4_GUITC

0.864

L1JQS6_GUITC

0.785

L1K2W6_GUITC

0.683

L1I7P2_GUITC

0.661

L1IWN1_GUITC

0.658

L1IX38_GUITC

0.658

L1IEU9_GUITC

0.645

L1IPZ9_GUITC

0.645

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1I7P2_GUITC	L1IBM4_GUITC	L1I7P2	L1IBM4	Uncharacterized protein.	Uncharacterized protein.	0.863
L1I7P2_GUITC	L1IEU9_GUITC	L1I7P2	L1IEU9	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.643
L1I7P2_GUITC	L1IPZ9_GUITC	L1I7P2	L1IPZ9	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.643
L1I7P2_GUITC	L1IWN1_GUITC	L1I7P2	L1IWN1	Uncharacterized protein.	Uncharacterized protein.	0.896
L1I7P2_GUITC	L1IX38_GUITC	L1I7P2	L1IX38	Uncharacterized protein.	BUB1 N-terminal domain-containing protein.	0.896
L1I7P2_GUITC	L1J3J4_GUITC	L1I7P2	L1J3J4	Uncharacterized protein.	Uncharacterized protein.	0.661
L1I7P2_GUITC	L1JAQ1_GUITC	L1I7P2	L1JAQ1	Uncharacterized protein.	DUF5595 domain-containing protein.	0.933
L1I7P2_GUITC	L1JQS6_GUITC	L1I7P2	L1JQS6	Uncharacterized protein.	HORMA domain-containing protein.	0.877
L1I7P2_GUITC	L1JVY9_GUITC	L1I7P2	L1JVY9	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.402
L1I7P2_GUITC	L1K2W6_GUITC	L1I7P2	L1K2W6	Uncharacterized protein.	Uncharacterized protein.	0.839
L1IBM4_GUITC	L1I7P2_GUITC	L1IBM4	L1I7P2	Uncharacterized protein.	Uncharacterized protein.	0.863
L1IBM4_GUITC	L1IEU9_GUITC	L1IBM4	L1IEU9	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.580
L1IBM4_GUITC	L1IPZ9_GUITC	L1IBM4	L1IPZ9	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.580
L1IBM4_GUITC	L1IWN1_GUITC	L1IBM4	L1IWN1	Uncharacterized protein.	Uncharacterized protein.	0.938
L1IBM4_GUITC	L1IX38_GUITC	L1IBM4	L1IX38	Uncharacterized protein.	BUB1 N-terminal domain-containing protein.	0.938
L1IBM4_GUITC	L1J3J4_GUITC	L1IBM4	L1J3J4	Uncharacterized protein.	Uncharacterized protein.	0.864
L1IBM4_GUITC	L1JAQ1_GUITC	L1IBM4	L1JAQ1	Uncharacterized protein.	DUF5595 domain-containing protein.	0.999
L1IBM4_GUITC	L1JQS6_GUITC	L1IBM4	L1JQS6	Uncharacterized protein.	HORMA domain-containing protein.	0.986
L1IBM4_GUITC	L1JVY9_GUITC	L1IBM4	L1JVY9	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.511
L1IBM4_GUITC	L1K2W6_GUITC	L1IBM4	L1K2W6	Uncharacterized protein.	Uncharacterized protein.	0.861