STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1J3W6_GUITCMFS domain-containing protein. (259 aa)    
Predicted Functional Partners:
L1JSU9_GUITC
Beta-Casp domain-containing protein.
    
 0.673
L1JBU7_GUITC
Uncharacterized protein.
    
 0.664
L1JNE9_GUITC
DUF3677 domain-containing protein.
    
 0.664
L1ID42_GUITC
Uncharacterized protein.
    
 0.662
L1JSY4_GUITC
Uncharacterized protein.
    
 0.651
L1IVA1_GUITC
Uncharacterized protein.
    
 0.650
L1JND3_GUITC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.605
L1K422_GUITC
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.573
L1JPB3_GUITC
VWFA domain-containing protein.
    
 0.569
L1JYV0_GUITC
RPOLD domain-containing protein.
    
 0.549
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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