STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1J5X1_GUITCHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (454 aa)    
Predicted Functional Partners:
L1JRH5_GUITC
Uncharacterized protein.
   
 0.941
L1JV34_GUITC
ING domain-containing protein.
   
 0.904
L1JFJ1_GUITC
Uncharacterized protein.
    
 0.898
L1JX63_GUITC
PHD-type domain-containing protein.
   
 
 0.891
L1IJL3_GUITC
Uncharacterized protein.
   
 0.860
L1JMH9_GUITC
WD_REPEATS_REGION domain-containing protein.
   
 0.860
L1JQS2_GUITC
Uncharacterized protein.
   
 0.807
Smc3
Sister chromatid cohesin complex subunit, structural maintenance of chromosome protein 3, SMC3.
   
 0.806
L1IIQ5_GUITC
Uncharacterized protein.
   
 0.800
L1JJ53_GUITC
MRG domain-containing protein.
   
 0.794
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.