STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1J604_GUITCUncharacterized protein. (343 aa)    
Predicted Functional Partners:
L1ICB9_GUITC
BSD domain-containing protein.
    
 0.999
ERCC2
ERCC2/XPD/Rad3 nucleotide excision repair.
    
 0.999
ERCC3
ERCC3/XPB/SSL2/Rad25 nucleotide excision repair.
    
 0.999
TFIIH
SSL1 transcription factor & nucleotide excision repair.
   
 0.999
L1JH22_GUITC
Uncharacterized protein.
    
 0.999
L1JJ42_GUITC
HTH TFE/IIEalpha-type domain-containing protein.
   
 0.999
L1JJA4_GUITC
Uncharacterized protein.
   
 0.999
TFB2
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.999
L1IS88_GUITC
RNA polymerase II subunit 9, RPB9.
    
 0.987
L1K422_GUITC
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.987
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.