STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1J7K1_GUITCUncharacterized protein. (368 aa)    
Predicted Functional Partners:
L1IJ18_GUITC
Uncharacterized protein.
     
 0.507
L1JX59_GUITC
Uncharacterized protein.
   
 
 0.485
L1I7I0_GUITC
Uncharacterized protein.
   
 0.478
COPIB1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 
  0.419
L1I4U9_GUITC
WD_REPEATS_REGION domain-containing protein.
    
 0.415
RACK1
Small subunit ribosomal protein RACK1, cytoplasmic.
    
 0.415
L1I8M7_GUITC
WD_REPEATS_REGION domain-containing protein.
    
 0.415
L1I8R1_GUITC
WD_REPEATS_REGION domain-containing protein.
    
 0.415
L1IZD2_GUITC
WD_REPEATS_REGION domain-containing protein.
    
 0.415
L1JN46_GUITC
WD_REPEATS_REGION domain-containing protein.
    
 0.415
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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