STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFIIHSSL1 transcription factor & nucleotide excision repair. (289 aa)    
Predicted Functional Partners:
L1ICB9_GUITC
BSD domain-containing protein.
    
 0.999
ERCC2
ERCC2/XPD/Rad3 nucleotide excision repair.
    
 0.999
L1J604_GUITC
Uncharacterized protein.
   
 0.999
ERCC3
ERCC3/XPB/SSL2/Rad25 nucleotide excision repair.
    
 0.999
L1JH22_GUITC
Uncharacterized protein.
   
 0.999
L1JJ42_GUITC
HTH TFE/IIEalpha-type domain-containing protein.
   
 0.999
TFB2
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.999
L1JJA4_GUITC
Uncharacterized protein.
   
 0.994
L1JRM5_GUITC
Uncharacterized protein.
    
 0.991
L1JUL1_GUITC
DNA-directed RNA polymerase II subunit, RPB4.
    
 0.989
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.