L1JCA6_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1JCA6_GUITC

Myb-like domain-containing protein. (458 aa)

Predicted Functional Partners:

L1IF21_GUITC

0.489

L1INU9_GUITC

0.471

L1IPI8_GUITC

0.471

L1IRB4_GUITC

0.471

L1JA52_GUITC

0.471

L1JKX9_GUITC

0.458

L1JAD5_GUITC

0.439

L1IZB6_GUITC

0.435

L1J3G8_GUITC

0.426

L1JDG1_GUITC

0.426

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1IF21_GUITC	L1INU9_GUITC	L1IF21	L1INU9	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-superoxide dismutase fusion protein.	0.719
L1IF21_GUITC	L1IPI8_GUITC	L1IF21	L1IPI8	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	High mobility group box fusion protein.	0.719
L1IF21_GUITC	L1IRB4_GUITC	L1IF21	L1IRB4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin_small subunit ribosomal protein S27Ae fusion protein.	0.719
L1IF21_GUITC	L1JA52_GUITC	L1IF21	L1JA52	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	High mobility group box fusion protein.	0.719
L1IF21_GUITC	L1JCA6_GUITC	L1IF21	L1JCA6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Myb-like domain-containing protein.	0.489
L1IF21_GUITC	L1JKX9_GUITC	L1IF21	L1JKX9	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	HTH OST-type domain-containing protein.	0.969
L1INU9_GUITC	L1IF21_GUITC	L1INU9	L1IF21	Ubiquitin-superoxide dismutase fusion protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.719
L1INU9_GUITC	L1IPI8_GUITC	L1INU9	L1IPI8	Ubiquitin-superoxide dismutase fusion protein.	High mobility group box fusion protein.	0.904
L1INU9_GUITC	L1IRB4_GUITC	L1INU9	L1IRB4	Ubiquitin-superoxide dismutase fusion protein.	Ubiquitin_small subunit ribosomal protein S27Ae fusion protein.	0.900
L1INU9_GUITC	L1IZB6_GUITC	L1INU9	L1IZB6	Ubiquitin-superoxide dismutase fusion protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.973
L1INU9_GUITC	L1J3G8_GUITC	L1INU9	L1J3G8	Ubiquitin-superoxide dismutase fusion protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.884
L1INU9_GUITC	L1JA52_GUITC	L1INU9	L1JA52	Ubiquitin-superoxide dismutase fusion protein.	High mobility group box fusion protein.	0.904
L1INU9_GUITC	L1JCA6_GUITC	L1INU9	L1JCA6	Ubiquitin-superoxide dismutase fusion protein.	Myb-like domain-containing protein.	0.471
L1INU9_GUITC	L1JDG1_GUITC	L1INU9	L1JDG1	Ubiquitin-superoxide dismutase fusion protein.	Uncharacterized protein.	0.884
L1IPI8_GUITC	L1IF21_GUITC	L1IPI8	L1IF21	High mobility group box fusion protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.719
L1IPI8_GUITC	L1INU9_GUITC	L1IPI8	L1INU9	High mobility group box fusion protein.	Ubiquitin-superoxide dismutase fusion protein.	0.904
L1IPI8_GUITC	L1IRB4_GUITC	L1IPI8	L1IRB4	High mobility group box fusion protein.	Ubiquitin_small subunit ribosomal protein S27Ae fusion protein.	0.900
L1IPI8_GUITC	L1IZB6_GUITC	L1IPI8	L1IZB6	High mobility group box fusion protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.973
L1IPI8_GUITC	L1J3G8_GUITC	L1IPI8	L1J3G8	High mobility group box fusion protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.884
L1IPI8_GUITC	L1JA52_GUITC	L1IPI8	L1JA52	High mobility group box fusion protein.	High mobility group box fusion protein.	0.901