L1JCU8_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1JCU8_GUITC

Uncharacterized protein. (203 aa)

Predicted Functional Partners:

L1JMM0_GUITC

0.999

L1JR19_GUITC

0.980

L1K2S7_GUITC

0.980

L1J6G9_GUITC

0.955

L1J6X1_GUITC

0.936

L1IZZ9_GUITC

0.900

L1JX24_GUITC

0.900

L1JHV6_GUITC

0.849

L1IKH7_GUITC

0.818

L1IND4_GUITC

0.818

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1IKH7_GUITC	L1IND4_GUITC	L1IKH7	L1IND4	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.924
L1IKH7_GUITC	L1JCU8_GUITC	L1IKH7	L1JCU8	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Uncharacterized protein.	0.818
L1IKH7_GUITC	L1JMM0_GUITC	L1IKH7	L1JMM0	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.	0.819
L1IND4_GUITC	L1IKH7_GUITC	L1IND4	L1IKH7	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.924
L1IND4_GUITC	L1JCU8_GUITC	L1IND4	L1JCU8	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	Uncharacterized protein.	0.818
L1IND4_GUITC	L1JMM0_GUITC	L1IND4	L1JMM0	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.	0.819
L1IZZ9_GUITC	L1J6G9_GUITC	L1IZZ9	L1J6G9	Uncharacterized protein.	Phos_pyr_kin domain-containing protein.	0.902
L1IZZ9_GUITC	L1J6X1_GUITC	L1IZZ9	L1J6X1	Uncharacterized protein.	Pyridox_oxase_2 domain-containing protein.	0.900
L1IZZ9_GUITC	L1JCU8_GUITC	L1IZZ9	L1JCU8	Uncharacterized protein.	Uncharacterized protein.	0.900
L1IZZ9_GUITC	L1JMM0_GUITC	L1IZZ9	L1JMM0	Uncharacterized protein.	SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.	0.936
L1IZZ9_GUITC	L1JX24_GUITC	L1IZZ9	L1JX24	Uncharacterized protein.	Uncharacterized protein.	0.904
L1J6G9_GUITC	L1IZZ9_GUITC	L1J6G9	L1IZZ9	Phos_pyr_kin domain-containing protein.	Uncharacterized protein.	0.902
L1J6G9_GUITC	L1J6X1_GUITC	L1J6G9	L1J6X1	Phos_pyr_kin domain-containing protein.	Pyridox_oxase_2 domain-containing protein.	0.931
L1J6G9_GUITC	L1JCU8_GUITC	L1J6G9	L1JCU8	Phos_pyr_kin domain-containing protein.	Uncharacterized protein.	0.955
L1J6G9_GUITC	L1JMM0_GUITC	L1J6G9	L1JMM0	Phos_pyr_kin domain-containing protein.	SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.	0.933
L1J6G9_GUITC	L1JX24_GUITC	L1J6G9	L1JX24	Phos_pyr_kin domain-containing protein.	Uncharacterized protein.	0.902
L1J6X1_GUITC	L1IZZ9_GUITC	L1J6X1	L1IZZ9	Pyridox_oxase_2 domain-containing protein.	Uncharacterized protein.	0.900
L1J6X1_GUITC	L1J6G9_GUITC	L1J6X1	L1J6G9	Pyridox_oxase_2 domain-containing protein.	Phos_pyr_kin domain-containing protein.	0.931
L1J6X1_GUITC	L1JCU8_GUITC	L1J6X1	L1JCU8	Pyridox_oxase_2 domain-containing protein.	Uncharacterized protein.	0.936
L1J6X1_GUITC	L1JMM0_GUITC	L1J6X1	L1JMM0	Pyridox_oxase_2 domain-containing protein.	SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.	0.901